Peptide and Protein Synthesis
- 2001
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Transcript
00:00:00 It was 10 to the 10th BC when it all began.
00:00:22 Water and the elements were formed.
00:00:32 Galaxies, stars, and our Earth were formed.
00:00:52 Four million years ago, life appeared.
00:00:57 In our lifetime, there have been remarkable advances in science and technology that have
00:01:02 profoundly changed our world.
00:01:05 We have looked to the ends of our universe and mapped the oceans.
00:01:10 We have advanced the laws of relativity and quantum theory and discovered additional elements
00:01:15 and subatomic particles.
00:01:17 In experimental chemistry and biology, we identified DNA as the fundamental genetic
00:01:22 material that directs the synthesis of protein.
00:01:26 Recently, we sequenced the human genome.
00:01:30 In peptide science, we now know the compositions and amino acid sequences of thousands of proteins.
00:01:37 We have determined many three-dimensional structures.
00:01:41 The field of proteomics is developing rapidly.
00:01:45 Peptide science can be divided into three broad areas, chemistry, physics, and biology.
00:01:52 They depend on each other and are complementary.
00:01:55 Our focus in this program will be on synthetic chemistry.
00:01:59 We have synthesized large numbers of naturally occurring peptide hormones and have designed
00:02:04 novel peptide structures that are effective therapeutics.
00:02:09 We can synthesize thousands or even millions of peptides in a single experiment, test them
00:02:14 for biological activity, and use this information for drug discovery.
00:02:19 In certain cases, we can produce multi-kilogram quantities of synthesized peptides.
00:02:26 All of this flows from discoveries that are part of our history.
00:02:36 None of this would be possible without the work of many people beginning exactly 100
00:02:41 years ago when the great organic chemist, Emil Fischer, synthesized the first peptide.
00:02:47 Fischer coined the term peptide and proposed the polyamide structure for proteins.
00:02:54 Whereas professional colleagues fear that a rational study of this class of compounds,
00:02:59 because of their complicated structure and their highly inconvenient physical characteristics,
00:03:05 would today still uncover insurmountable difficulties, other optimistically endowed observers, among
00:03:12 which I will count myself, are inclined to the view that an attempt should at least be
00:03:16 made to besiege this virgin fortress with all the expedience of the present, because
00:03:22 only through this hazardous affair can the limitations of the ability of our methods
00:03:27 be ascertained.
00:03:29 Of course, because no sequence was known at that time, Fischer could not synthesize a
00:03:33 natural protein.
00:03:35 Some believe that proteins were not single homogeneous compounds, but Fischer laid the
00:03:40 groundwork for achievements that came about 60 years later.
00:03:44 Fischer and other scientists such as Theodor Kutius, Emil Abderhalden, and Hermann Leuchts
00:03:49 were critically handicapped.
00:03:51 There were no reversible protecting groups for the alpha amine.
00:04:02 Fittingly, it was one of Fischer's former students, Max Bergmann, with his associate
00:04:06 Leonidas Servas, who solved the amino protecting group problem 30 years later.
00:04:12 However, the carbobenzoxy group can be removed by catalytic hydrogenolysis.
00:04:17 The discovery instantly transformed the field and is still used today.
00:04:22 In 1937, Josef Fruton joined Bergmann and used the carbobenzoxy method to synthesize
00:04:28 a large number of small free peptides.
00:04:31 This allowed him to determine the substrate specificity of proteolytic enzymes.
00:04:36 This was the first time synthetic peptides were used to solve an existing biochemical
00:04:41 problem.
00:04:42 It was a landmark achievement.
00:04:46 Miklosz Bodanski contributed to the field by dividing peptide synthesis into strategy
00:04:51 and tactics.
00:04:53 Strategy describes synthesis design, while tactics focuses on detailed chemical procedures.
00:05:00 In spite of this new approach, important developments in reversible N-alpha amine protection tactics
00:05:05 were slow to emerge.
00:05:08 In 1957, Louis Carpino, using modern physical organic chemistry principles, proposed the
00:05:14 tertiary butyl function for a urethane protecting group.
00:05:18 It was a better leaving group than benzyl and could be removed in mild acid.
00:05:23 This led to the development of the BAC group.
00:05:27 The next major development in amine protection occurred in 1972, again by Carpino, who introduced
00:05:33 the base labile acid stable FMOC group.
00:05:37 The FMOC group can be removed by beta elimination with piperidine.
00:05:42 In 1978, the Meyenhofer group and the Shepard group independently used FMOC protection in
00:05:48 all steps of a long synthesis.
00:05:51 The orthogonality of this base labile group and the acid labile side chain tert-butyl
00:05:56 group is an important advantage.
00:06:01 So I became involved with Hans and Xu Ducheng to prepare, by stepwise solid phase synthesis,
00:06:09 using the FMOC t-butyl strategy, making somatostatin, and it worked out extremely well.
00:06:14 The FMOC strategy also has the added advantage that you can monitor the deprotection of the
00:06:22 FMOC group at every stage using absorption methodologies.
00:06:31 Other N-alpha protecting groups have been introduced, including those removable under
00:06:35 neutral conditions by photolysis, dialysis, and solvolysis.
00:06:47 Vincent Duvigneau used sodium in liquid ammonia to remove benzyl groups instead of catalytic
00:06:52 hydrogenolysis, which cannot be used for sulfur-containing peptides.
00:06:58 It was later shown that catalytic hydrogenolysis in liquid ammonia can be used for sulfur-containing
00:07:04 peptides.
00:07:05 Hans had learned before he came to Roche that it was possible to use liquid ammonia to be
00:07:11 able to, with palladium black, to be able to catalytically hydrogenate, for example,
00:07:17 a carbobenzoxy group or a benzyl ester.
00:07:20 So he suggested to me that I use that methodology in the synthesis of somatostatin.
00:07:26 It was very straightforward.
00:07:30 In 1966, Shumpei Sakakibara made the important discovery that anhydrous liquid hydrogen fluoride
00:07:37 was a safe and powerful cleavage reagent.
00:07:41 Sakakibara was a student of the pioneering protein chemist Shiro Akabori.
00:07:46 At that time, I was working with one Korean post-doctor.
00:07:53 He just tried to put carbon dioxide peptide in HF, and he thought that nothing happened.
00:08:03 This was immediately found that carbon dioxide evolved from the HF solution, and the solution
00:08:12 gave us some amorphous white precipitate.
00:08:16 Amorphous oily materials come out from the solution.
00:08:21 Of course, the solution turned to pinky colors, I think due to some small metals.
00:08:33 We tried to recover the compound and found that no carbon dioxide remained in the structure.
00:08:41 At that time, I asked Dr. George Hess, this must be a very interesting reaction.
00:08:48 I asked him to continue this work besides studying the rate of the O2N or N2O shift
00:08:56 or cleavage of peptide bond by HF.
00:08:59 But he did not show any interest in that.
00:09:03 And he asked me if I'd like to do this work in Cornell.
00:09:08 Must do it on Sunday, not on working day.
00:09:12 In 1982, James Tam and Bill Heath found a way to minimize side reactions with this strong
00:09:18 anhydrous acid.
00:09:20 They used dimethyl sulfide as a base to reduce acid strength while retaining the ability
00:09:26 to cleave esters, ethers, and urethanes.
00:09:37 In 1884, Curtius was the first to report the activation of a protected amino acid.
00:09:43 He used the azide to form the peptide bond.
00:09:47 Joseph Ruttinger improved this method in 1961.
00:09:52 During the rapid growth period in peptide synthesis in the 1950s, Theodor Wieland first
00:09:57 introduced mixed anhydrides.
00:09:59 The anhydride method was followed by Wieland's use of thiophenyl esters as coupling reagents.
00:10:06 I derived from the Theodor Wieland School, world famous in peptide chemistry because
00:10:13 he among others dates back in his peptide chemistry developments to Emil Fischer's work
00:10:21 because Theodor Wieland is the son of the Nobel Laureate Heinrich Wieland and Heinrich
00:10:27 Wieland was the successor of Emil Fischer.
00:10:31 Theodor Wieland is world famous for his patience, his tolerance, his friendliness.
00:10:38 He never created enemies.
00:10:41 I don't know a single one.
00:10:45 So he is one of these characters which really combine the various religious beliefs in how
00:10:52 to deal with the human race, with human beings.
00:10:58 To me he was an ideal leader.
00:11:02 Robert Schweitzer soon proposed cyanomethyl esters and Bodansky then introduced nitrophenyl esters.
00:11:08 Others have introduced a variety of additional activated esters.
00:11:13 John Sheehan made one of the greatest advances in coupling reagents.
00:11:17 He utilized dicyclohexylcarbodiimide to close the beta-lactam in penicillin and extended
00:11:24 its application to the formation of the peptide bond.
00:11:28 Previously Todd Kenner and Korana had used carbodiimide successfully for dinucleotide
00:11:33 synthesis and had even made amide bonds but they did not apply it to peptides.
00:11:39 Murray Goodman tells the diimide story.
00:11:42 I began my work in the area of peptide chemistry in the laboratories of John Sheehan and that
00:11:51 was in late 1952.
00:11:54 John Sheehan was in England in 1951 and heard some wonderful stories about the use of carbodiimides
00:12:07 in the area of nucleotide synthesis in Cambridge in the laboratories of Professor Todd.
00:12:16 This was work carried out by H. Gobin Korana and it was truly a breakthrough in nucleotide synthesis.
00:12:28 We had a full and extensive discussion about these molecules and John Sheehan assigned
00:12:37 the synthesis of dicyclohexylcarbodiimide to George Hess and ditalylcarbodiimide to me.
00:12:46 We then undertook the synthesis of these molecules.
00:12:50 It turns out that the synthesis of ditalylcarbodiimide is much easier than the synthesis of dicyclohexylcarbodiimide.
00:12:58 I found that I could make this quite readily and prepare derivatives of protected amino acids and peptides,
00:13:09 most of which were crystalline and totally useless in the field of peptide chemistry
00:13:16 because the ditalylcarbodiimide rearranged rapidly to the acylureas,
00:13:22 which were stable crystalline and unreactive compounds.
00:13:26 George Hess proceeded very slowly and efficiently and produced dicyclohexylcarbodiimide,
00:13:34 a rather amorphous nondescript reagent,
00:13:41 which when added to a protected amino acid and then mixed with an amine component
00:13:50 produced an amide derivative, or if it was an amino ester, a peptide derivative, readily and in high yield.
00:13:58 George Hess's route to dicyclohexylcarbodiimide led to a revolution in peptide synthesis.
00:14:08 In recent years, a number of new activating reagents have been developed.
00:14:12 Bertrand Castro introduced BOP, a phosphonium salt, as a very reactive coupling reagent.
00:14:18 But it was enough to tweak our interest, so we decided to try using this BOP reagent for the cyclization,
00:14:24 and we got a big surprise that it was the most efficient reagent for the on-resin cyclization.
00:14:31 Dortoglu and later Knorr reported other reagents that replaced phosphonium derivatives with uronium salts.
00:14:38 N-carboxyanhydrides, or NCAs, were introduced by Leuchs and used to prepare polyalpha amino acids.
00:14:46 Denkwalter and Hirschman adapted NCAs to a stepwise procedure in aqueous solution under carefully controlled conditions.
00:14:55 Goodman and his co-workers obtained urethane-protected N-carboxyanhydrides, or UNCAs, in stable crystalline condition.
00:15:04 They are very reactive, even in hindered couplings.
00:15:14 In 1953, the first landmark synthesis of a biologically active peptide occurred when Duvignaux synthesized the nonapeptide oxytocin.
00:15:24 With associates Charlotte Ressler and Panagiotis Katsianis and others, Duvignaux drew on the large array of chemical methods available at the time.
00:15:32 One day I received a letter in the mail from Vincent Duvignaux inviting me to join him at Cornell Medical College
00:15:41 on his program on the structure activity studies of oxytocin and visopressin.
00:15:48 Well, the reason the fragment strategy was used, because that was all that was available at the time.
00:15:55 This was prior to the days of the Paralyte to Front Lester active ester synthesis.
00:16:00 The stepwise approach hadn't even come along.
00:16:03 And so they were dependent on using, for protection of the amino groups, carbon monoxy and protection of the arginine group, the tosyl.
00:16:13 And they had very limited availability of coupling methods.
00:16:18 So basically, you know, it was a trial and error of how to actually put the molecule together.
00:16:25 Starting with the tetrapeptide, then making the pentapeptide, then adding two more, and then finally coupling the seven and the two.
00:16:32 But the linchpin was actually the sodium liquid ammonia method.
00:16:38 The sodium liquid ammonia method had arisen from Duvignaux's work on insulin years earlier.
00:16:45 And it was the application of the sodium liquid ammonia method to the synthesis of oxytocin that really allowed Duvignaux to break through to accomplish the synthesis.
00:16:58 Buransky actually had been in Hungary working on oxytocin and working on active ester methods.
00:17:04 But in 1956, after the Hungarian Revolution, he came to Duvignaux's lab.
00:17:09 And Duvignaux, of course, was very happy to have a very experienced peptide chemist in his group.
00:17:14 And Buransky came with the active ester method.
00:17:18 And again, this, I think, was Duvignaux's strength, that he was able to capitalize on the talents of the people that came to work with him.
00:17:25 So he immediately saw the value of trying to make oxytocin using the active ester method.
00:17:31 I first became interested in peptide chemistry as a result of a phone call from Professor Vincent Duvignaux, who was a Nobel laureate,
00:17:42 who was the discoverer of oxytocin, did the total synthesis, the structure,
00:17:51 and actually put it in clinical medicine with his medical colleagues shortly thereafter.
00:17:58 And it's been used by literally hundreds of millions of women ever since.
00:18:03 And so I went to Duvignaux's laboratory.
00:18:05 I was very fortunate that I worked with Don Yamashiro, who was really an expert in the total synthesis of peptides at that time.
00:18:13 But it took several months just to synthesize acetone oxytocin in those days.
00:18:18 And so we worked out a very good synthesis, just so I could have large amounts for doing NMR and other physical studies,
00:18:24 infrared spectroscopy, UV, and so forth.
00:18:27 And we finally did solve the structure.
00:18:29 The oxytocin synthesis by Duvignaux was the forerunner of a flood of work on peptide hormones by peptide chemists.
00:18:37 These included vasopressin, again by Duvignaux in 1954, angiotensin by Riddle and Schweitzer in 1957, and alpha MSH by Boissonnaz in 1958.
00:18:50 That was the time when I was working with Robert Schweitzer.
00:18:54 Up in Zurich at the ETH, Robert Schweitzer has been a professor at the ETH and had a school,
00:19:02 one of the schools of peptide chemistry and peptide biology in Switzerland.
00:19:08 He was certainly one of the founders of peptide research.
00:19:13 He started, I think, his peptide research at CIPA Geigy.
00:19:19 You know, he was a kind of a pupil of Paul Carroll, who was a Nobel laureate.
00:19:26 And that's where he became interested in amino acids first.
00:19:31 And his first peptide was angiotensin, which he made, hypertensin called at the time.
00:19:37 And then at the beginning of the 60s, he synthesized ACTH 1-24 and soon afterwards ACTH 1-39,
00:19:46 which was the longest peptide at that time.
00:19:49 In the early 1960s, synthetic fragments of the ribonuclease S-peptide were reported independently by the Hoffman and Scaffoni groups.
00:19:57 Other notable synthetic achievements include gastrin by Kenner in 1965, secretin by Budansky and Andetti in 1966, and glucagon by Vinch in 1967.
00:20:10 By the mid-1960s, larger peptides were synthesized, such as ACTH 1-24 by Beiermann and by Schweitzer.
00:20:19 ACTH 1-39 was independently synthesized by both Schweitzer and Sieber and a team composed of the Bayeux, Kisfaluti and Medzarotsky groups.
00:20:29 When we finished the polyglutamic acid synthesis, then we switched a little bit and there came a good opportunity for cooperation in the peptide chemistry.
00:20:39 It means that two research groups dealing with peptide chemistry, one of the research institutes of the Pharmaceutical Research Institute led by Dr. Bayeux
00:20:49 and the other one from the Gedeon-Richter factory led by Dr. Kisfaluti, and myself from the Institute of Organic Chemistry with the leadership or organizer of the whole group is Professor Bruckner,
00:21:01 and we decided to synthesize the human ACTH.
00:21:04 It's just the classical route and the synthesis consisted of 132 chemical steps.
00:21:13 The race to synthesize insulin was quite remarkable.
00:21:17 This 51-residue, two-chain peptide was first sequenced by Friedrich Sanger in 1952.
00:21:24 The Katsayanis group in Pittsburgh first reported their synthesis in June of 1963, but their publication did not appear until 1964.
00:21:33 The Zahn group completed their synthesis in late 1963 and published their findings at the end of that same year.
00:21:41 The Chinese group had also been reporting progress for several years, but didn't publish their final synthesis of active insulin until 1965.
00:21:52 All three groups used standard solution fragment strategies, but with somewhat different tactics.
00:21:58 The difficult step in all three cases was to combine the separate purified A and B chains to give the correct three disulfide bonds.
00:22:07 This was the yield-limiting step.
00:22:12 I am Helmut Zahn. I am presently Professor Emeritus of our Rheinisch-Westfälische Technische Hochschule,
00:22:21 and we had the idea, let's synthesize tyrosine peptides from insulin to study the role of tyrosine for properties.
00:22:31 Johannes Meinhofer, who had spent a sabbatical year in the United States,
00:22:41 he had worked with Zahn with insulin, actually, using for the first time bifunctional reagents,
00:22:48 cross-linked reagents, and determined distances within insulin at a very early time, in 1958 or so.
00:22:57 So he went to America, also Eugen Schnabel went to America, both returned,
00:23:02 and then, I think, Johannes Meinhofer told Zahn, well, this making of small insulin peptides is not very useful,
00:23:13 we should really head for insulin chains.
00:23:15 Of course, we knew of the competition of Pano-Katianis in the United States and of the Chinese groups.
00:23:23 The decisive event was 60, a publication by Dixon and Wartelow,
00:23:28 who have shown that it is possible to synthesize insulin if you have a synthetic A-chain and you have a synthetic B-chain.
00:23:37 We completed the synthesis of A-chain and B-chain in 62, 63.
00:23:47 The joining of the two chains was accomplished towards the end, the very end of 63.
00:23:55 And then we had a big problem.
00:23:58 We could, we have made some preparation, but we didn't know the biological activity,
00:24:04 and without a biological activity, we could not publish.
00:24:08 And it was shortly before Christmas, and we telephoned to Düsseldorf,
00:24:12 and this man said, no, it's Christmas time, nobody in the laboratory,
00:24:17 all the glucose, the radioactive glucose is no longer available.
00:24:21 But there is one very ambitious professor, Pfeiffer, in Frankfurt.
00:24:25 I telephoned him, he didn't know me.
00:24:27 Ja, wir machen das.
00:24:29 And then Meinhofer went by night train with a sample, two samples, to Frankfurt.
00:24:36 And Pfeiffer personally, his good friend, he no longer is, he passed away.
00:24:41 It was a pity.
00:24:43 And each night, they made the test of the two samples.
00:24:47 And Meinhofer came back, and he came, was I convinced, and he came in my room and said,
00:24:55 Professor Sahn, what is your suggestion?
00:24:58 How much activity have we in our preparation?
00:25:03 I said, if we have one, if we have 0.1, I would be happy,
00:25:08 because this was some of the data which, he said, 1%.
00:25:13 So the short account was quickly written up and submitted,
00:25:17 and yet, and still appeared in the December issue, 1963.
00:25:25 By then, the competitors, Katsianis, came out with their first paper beginning of 1964.
00:25:32 So it was really a very close run.
00:25:35 Yu Kang Du, one of the original young members of the insulin group in Shanghai,
00:25:40 summarizes the early work of these Chinese laboratories.
00:25:44 I worked on the insulin project at the beginning from 1958.
00:25:53 Just a graduate student came from Peking University.
00:25:59 At that time, the government asked people to do a big job.
00:26:05 So what should we do? What topics?
00:26:10 For example, some high blood pressure, or cancer, or synthesize, or something.
00:26:22 At last, they finished this argument,
00:26:28 decided to do the synthesis of protein.
00:26:36 But the first protein known the structure only when it's insulin.
00:26:46 So we chose the insulin to synthesize.
00:26:49 Should we say, Shanghai Institute of Biochemistry,
00:26:53 there were two groups called a combination of H&B chain,
00:26:59 from H&B chain and the B-chain synthesizing.
00:27:04 And the H-chain synthesizing is collaboration by Peking University and the Organic Chemistry Institute.
00:27:14 The team, we are very young.
00:27:18 All of us are less than 30 years old.
00:27:21 I think I was 28 years old.
00:27:25 My child is only one year old.
00:27:28 And my colleagues, their children are also one or two years old.
00:27:35 So the children left in Beijing or in other places,
00:27:41 and only ourselves in Shanghai.
00:27:45 We work till morning, until night, and also in the weekend.
00:27:51 We never have a relaxing weekend.
00:27:56 So every day we work very hard.
00:27:59 We hope to get the first synthesis of insulin in the world.
00:28:06 Talking about the major problems for the synthesis of insulin,
00:28:12 in my opinion, I think it is the combination of peptide chains.
00:28:20 Du carried out 600 experiments to find the best conditions to refold native A and B chains.
00:28:27 One of the keys to success was operating at 4 degrees centigrade.
00:28:32 In 1966, Arnold Margolin showed that the A and B chains could be synthesized by solid phase methods,
00:28:38 and when oxidized by Du's method, gave rise to insulin activity similar to that from the other syntheses.
00:28:45 It seemed to me, and to Bruce, that the way to do the problem was to synthesize the B chain,
00:28:52 synthesize the A chain, purify them as well as they could be purified,
00:28:56 and then try to recombine them by methods that were similar to what had been done elsewhere.
00:29:02 I synthesized the B chain first because it was a longer chain.
00:29:06 That had to do with Bruce's conviction that a long peptide could be made,
00:29:12 and I think in part his impatience to get the longer peptide made first.
00:29:18 The B chain had 30 residues, the A chain had 21.
00:29:22 That was actually fortunate because the B chain was easier to synthesize, as it turned out,
00:29:26 and made the B chain, struggled with the A chain, finally was able to make a decent A chain,
00:29:32 and then was able to recombine them.
00:29:35 What you could do was take natural chains, treat them the same way,
00:29:39 and show that the synthetic products were identical to natural chains.
00:29:42 That was the best you're going to get.
00:29:44 If you change the stoichiometry of the reaction,
00:29:47 for example, you had more B chain than A chain, or more A chain than B chain,
00:29:50 or anyway, you change the stoichiometry in some way,
00:29:53 and then you monitored the yield based on the change in stoichiometry,
00:29:57 you could perhaps get a better recombination yield.
00:30:01 That was what the Chinese under Liu Kang did,
00:30:05 and they did very good, careful analytical work
00:30:09 to show what the optimum chain proportions might be,
00:30:14 and so we used that method.
00:30:16 The yields were comparable to yields that had been got by classical non-solid phase techniques.
00:30:24 A few years later, Sieber's group completed a total synthesis of insulin
00:30:28 by selective formation of the three disulfides.
00:30:39 This produced crystalline human insulin of full biological activity.
00:30:47 Margolin believed that insulin is synthesized in vivo as a single chain,
00:30:51 and after folding and disulfide formation was cleaved into two chains.
00:30:56 Well, biosynthesis of insulin at that time was thought to occur in two chains.
00:31:02 There was evidence that the A and the B chain could profitably be looked at as one chain.
00:31:08 At exactly that time, Dorothy Hodgkin's group had solved the X-ray crystal structure of insulin,
00:31:15 and it turned out that indeed that was correct.
00:31:18 The B chain was close to the C terminal of the A chain.
00:31:25 So I thought, why not synthesize it that way,
00:31:28 and why bother to synthesize it in two chains since it was so hard to recombine the chains?
00:31:34 It might be better to just synthesize it in one chain anyway.
00:31:37 I thought that if I synthesized the two chains, separated them by methionine,
00:31:41 then cleaved the two chains, reoxidized them as a single chain project,
00:31:47 cleaved the two chains with cyanogen bromide,
00:31:51 I would end up with a C terminal residue that I could remove with a peptidase or some other method
00:31:58 and end up with my two insulin chains and not have to worry about the recombination,
00:32:03 which was still the big problem.
00:32:05 I did some work on that and actually synthesized an insulin
00:32:09 that had very close biological activity to the insulin I'd already synthesized.
00:32:13 While I was at the NIH, Don Steiner in Chicago showed that insulin was made in a single chain,
00:32:19 but that the linker protein was a 33 amino acid connecting peptide,
00:32:24 which somehow facilitated single chain approximation of insulin,
00:32:28 presumably as disulfide bonds were formed,
00:32:31 and then the connecting peptide was cleaved out by a series of enzymatic reactions to form insulin.
00:32:38 The Yamaihara group in Japan achieved a synthesis of pro-insulin.
00:32:42 This showed that insulin was folded and oxidized in high yield while in a single chain.
00:32:49 The insulin story was a landmark chapter in the history of peptide chemistry.
00:32:54 The research on insulin has continued up to the present day.
00:32:58 We very quickly recognized that we didn't want a monomeric insulin,
00:33:02 we wanted a rapidly dissociating hexamer,
00:33:05 because that would provide us the commercial stability so that it could be used in the marketplace,
00:33:11 but also the ability to mix it with long-acting insulins.
00:33:15 So it actually comes in two forms.
00:33:17 One is as the fast-acting insulin just for mealtime use,
00:33:21 but for those who also want to take it simultaneous to their long-acting evening insulin,
00:33:27 then they have a premix with what is known as NPH insulin.
00:33:33 And what we demonstrated was that by inverting what naturally is the proline-lysine sequence
00:33:39 in the C-terminus of the B-chain to lysine-proline,
00:33:42 something that occurs in the IGF-1 molecule, a homologous peptide,
00:33:48 that we were able to provide an insulin that did not self-associate to the propensity that human insulin did.
00:33:55 That gave you a more precise ability to administer the insulin
00:34:00 so that you had a quicker on rate and a quicker off rate.
00:34:03 And what has been shown in large-scale clinical studies and in practice
00:34:08 is that you can get improvements in hemoglobin A1c, glucose control.
00:34:13 You can get an appreciable reduction in the incidence of hypoglycemia,
00:34:19 as well as the added convenience of using the insulin at the time of the meal
00:34:23 as opposed to having to dose 30 to 45 minutes before the meal.
00:34:28 So it's clearly shown that it is a more efficacious insulin.
00:34:32 It's a more convenient insulin.
00:34:35 And today it's becoming the preferred insulin for treating insulin-dependent diabetes.
00:34:48 Rüdinger in 1958, with the encouragement of Frentisek Schorm,
00:34:52 director of the Institute of Chemistry in Prague,
00:34:55 organized the first European peptide symposium.
00:34:58 Rüdinger extended invitations to all leading peptide scientists in Europe.
00:35:03 Twelve European peptide chemists attended
00:35:06 to discuss the advancements and challenges within the field.
00:35:10 The symposium naturally centered on synthetic chemistry,
00:35:13 the central concern at the time.
00:35:16 In September 2000, the 26th symposium, organized by Jean Martinez,
00:35:21 was held in Montpellier.
00:35:23 These biennial meetings now host over 1,000 scientists.
00:35:28 In 1968, the American Peptide Symposium
00:35:32 was founded by Saul Landy and Boris Weinstein.
00:35:36 In the early 1990s, Japan, China, and Australia
00:35:40 each organized peptide societies.
00:35:43 These societies also organized periodic international peptide symposia.
00:35:48 At a Federation meeting in the spring of 1962,
00:35:58 Bruce Merrifield reported the general principle
00:36:01 of carrying out peptide synthesis on a solid support.
00:36:05 I was making these small phenepheptides,
00:36:09 and even though you could make them, it took a very long time,
00:36:13 the yields were very low, even for a small peptide,
00:36:17 and very time-consuming.
00:36:19 So as an amateur in the field, I thought,
00:36:23 well, there really ought to be some way to do this better,
00:36:27 some better way to make peptides than the classical methods
00:36:32 that everybody's using.
00:36:34 And I thought about it for some long time,
00:36:37 and then suddenly one night, I believe,
00:36:41 I had an idea, and it just came to me,
00:36:44 of how we might go about that.
00:36:47 And the idea was to make use of an insoluble, solid support
00:36:52 to hold the peptide chain while you're synthesizing it,
00:36:57 while it's growing in length.
00:37:00 And that was the fundamental idea.
00:37:04 It looked like if you could make it work,
00:37:08 and of course I had no idea whether you could or not,
00:37:11 that it would be simpler in the first place,
00:37:15 it would be more rapid,
00:37:17 and you might get better yields than you do by the standard method.
00:37:22 So that was the origin of the idea.
00:37:25 He figured out there ought to be a better way of doing it,
00:37:27 and sat down and wrote out the whole idea of solid-phase synthesis
00:37:31 in his lab notebook.
00:37:33 And I thought about it a day or two,
00:37:36 and then I had to go to the boss, to Dr. Woolley,
00:37:42 and we happened to be riding up to the fourth floor on the elevator.
00:37:47 So I told him in just a matter of 30 seconds or something
00:37:51 what the idea was, and what did he think about it.
00:37:54 And he got off and left. He didn't say anything.
00:37:57 Well, I wasn't too encouraged by that.
00:38:00 The next day, he came into my lab.
00:38:03 He says, you know, that's a pretty good idea.
00:38:06 Maybe you ought to work on that.
00:38:08 I said, well, great.
00:38:10 You know, if I could take off two or three months,
00:38:13 I could get this to work, or find out if it'll work.
00:38:18 And he said, okay. He thought that was reasonable.
00:38:21 And I went from there.
00:38:25 The difference is it wasn't three months, it was three years.
00:38:30 There were a lot of variables in this simple idea
00:38:35 that you had to work out,
00:38:37 and they all had to be worked out at the same time.
00:38:40 In other words, you had to have a solid,
00:38:43 mainly a resin support.
00:38:46 You had to have a way to attach the chain to it,
00:38:50 coupling reactions,
00:38:53 deprotection steps,
00:38:55 and finally removal of the peptide from the resin
00:38:58 at the end of the synthesis.
00:39:00 So each one of those turned out to be a much bigger problem
00:39:04 than I had anticipated.
00:39:07 And sometimes you could get one of them to work fine.
00:39:11 You may get a good resin,
00:39:13 but your coupling reaction was no good.
00:39:16 So it didn't work. The overall synthesis didn't work.
00:39:19 They had to all come together at the same time.
00:39:22 I started out with cellulose.
00:39:26 And the reason was I knew that cellulose
00:39:30 had been used to fractionate proteins.
00:39:33 So I thought, well, there must be room in this cellulose
00:39:37 to handle a material of that size.
00:39:41 So I started it, and I got a little way.
00:39:45 I made a dipeptide,
00:39:47 but it was much too fragile for the chemistry I was using.
00:39:50 That's another example of I had a support,
00:39:53 but I didn't have the right chemistry.
00:39:56 And so I had to give that up.
00:39:58 It didn't work well.
00:40:00 I tried other things like polyacrylamide,
00:40:03 methyl methacrylate,
00:40:07 even porous glass,
00:40:09 which is a good hard solid,
00:40:11 although not really a solid in the other sense.
00:40:15 And there were probably six or eight
00:40:21 resins or solids that I tried to use.
00:40:24 I tried to use the sulfonated polystyrene resins
00:40:30 that are used for amino acid and protein fractionation.
00:40:35 And I knew about them because I'd used them before
00:40:38 for that purpose.
00:40:39 So I was clearly influenced by that.
00:40:43 A lot of trouble.
00:40:44 A lot of trouble because they were highly substituted.
00:40:47 You had too many functional groups on them,
00:40:51 and you could do something with it,
00:40:54 but not very well.
00:40:56 And this is where all my three years went,
00:40:59 doing this sort of thing.
00:41:01 Then I got a hold from Dow Chemical,
00:41:04 a sample of a polystyrene cross-linked
00:41:08 with a little bit of divinyl benzene.
00:41:11 This is a starting material for their ion exchange resins.
00:41:15 They sent me some,
00:41:18 and of course you have to have a functional group on it.
00:41:21 So I decided, among other things, finally,
00:41:24 that a chloromethylation reaction
00:41:28 would give you a substituted benzyl chloride,
00:41:33 which is quite a reactive substance.
00:41:36 And having made that,
00:41:38 then I could take the amino acid
00:41:40 that I wanted to attach
00:41:42 and form a benzyl ester
00:41:45 of the carboxyl group.
00:41:47 Now that was the stable covalent bond,
00:41:52 which was holding the pheftide to the resin.
00:41:55 Then the question is,
00:41:57 how do you protect the amino end?
00:41:59 And I, of course, used the carbobenzoxy group.
00:42:02 It was too acid stable and caused side reactions.
00:42:06 Then I went to the new VOC group
00:42:09 because it could be removed
00:42:11 under mild acidic conditions.
00:42:14 The activating reagent was also very important.
00:42:18 The activesters, mixed anhydrides, and azides
00:42:22 were not fully satisfactory.
00:42:25 The best activating reagent
00:42:27 was dicyclohexylcarbodiimide.
00:42:30 It gave rapid reactions and went in very high yield.
00:42:35 To synthesize a longer pheftide,
00:42:37 the sequence of deprotection, neutralization, and coupling
00:42:42 was repeated over and over
00:42:44 for each subsequent amino acid.
00:42:47 Purification at every step
00:42:50 was by rapid and simple but thorough washing
00:42:53 to remove excess reagents and byproducts.
00:42:58 The last step was cleavage of the pheftide
00:43:01 from the solid support.
00:43:03 Hydrogen bromide and later hydrogen fluoride
00:43:07 were the best strong acid reagents.
00:43:10 A final selective purification procedure
00:43:13 was then necessary.
00:43:16 There were really three advantages.
00:43:18 One was the feed.
00:43:20 One was that you don't have to transfer the material
00:43:25 from one container to another
00:43:27 as you do in an ordinary synthesis.
00:43:31 Once you put it inside a reaction vessel,
00:43:33 it just stays there until the pheftide is completed.
00:43:37 So that's an advantage.
00:43:39 And maybe the most important is
00:43:43 at every intermediate stage of the synthesis,
00:43:47 every time you add an amino acid,
00:43:49 you just purify by simple,
00:43:53 thorough washing with solvent
00:43:56 and don't have to go through
00:43:59 chromatographic purification or crystallization,
00:44:04 which are good but very time-consuming.
00:44:07 And for a long pheftide,
00:44:10 and very few people working on it,
00:44:13 it becomes tedious and time-consuming.
00:44:17 It takes very long.
00:44:19 And so I think that's the other main advantage.
00:44:22 Initially, I had envisioned a flow system
00:44:25 for the synthesis using a pump.
00:44:28 I loaded resin into a tube
00:44:31 with a glass filter at the bottom
00:44:33 and a solvent inlet at the top.
00:44:36 This was a very crude system
00:44:38 and did not work well at all,
00:44:40 partly because the resin became compressed
00:44:43 and flugged the filter.
00:44:45 So I went to a vat process in a closed vessel
00:44:50 with a glass filter at the bottom
00:44:52 and a rocker to mix the reagents.
00:44:55 After about three years,
00:44:58 I had made a model tetra-pheftide.
00:45:02 And this worked really quite well by then.
00:45:06 At this point, I needed a name for the new process
00:45:10 and settled on solid-phase pheftide synthesis.
00:45:14 And at that time, I gave a favor
00:45:18 down at Atlantic City at the Federation meeting.
00:45:21 There was a reporter there that thought it was great.
00:45:24 There were two professional expert pheftide chemists
00:45:28 right down the front row.
00:45:30 Their reaction was not all that good.
00:45:33 They were skeptical,
00:45:35 and what I found over the years after that
00:45:37 is the vest of the pheftide chemists
00:45:41 were very reluctant to accept this idea.
00:45:44 There was a tremendous skepticism
00:45:46 among organic chemists
00:45:48 about the use of solid-phase chemistry
00:45:50 because intermediates were not being isolated
00:45:56 and their structure determined.
00:45:58 I wrote a full paper then for 1963
00:46:01 and described how to do it,
00:46:03 what I thought were the limitations.
00:46:05 There were a lot, and I knew about a lot of them.
00:46:08 And I mentioned those,
00:46:10 that you have to worry about these various things.
00:46:13 For example, the reactions have to go very close to 100%.
00:46:17 If they don't, you'll end up with
00:46:19 what we now call deletion pheftides,
00:46:21 where you'll have a missing link in your pheftide.
00:46:25 And I knew about that,
00:46:27 and we were very much concerned about it,
00:46:29 even in the first paper that we wrote.
00:46:32 The best example I have is the work that John Stewart did.
00:46:37 In this next year, I was able to synthesize
00:46:40 25 bradykinin analogs using solid-phase,
00:46:44 three in one year to 25 in a year.
00:46:47 In recent years,
00:46:48 Stewart has made effective antagonists of bradykinin
00:46:51 that are expected to become important drugs.
00:46:54 In 1964, Garland Marshall joined Merrifield
00:46:58 as his first graduate student.
00:47:00 He synthesized the hypertensive octopeptide angiotensin,
00:47:03 which extended the solid-phase method
00:47:05 to include new amino acids.
00:47:08 He was the first to realize
00:47:09 that a fragment synthesis was possible by this method.
00:47:12 Marshall felt strongly about the generality
00:47:15 of the solid-phase synthesis principle.
00:47:17 Bruce always said that,
00:47:21 you know, we're going to do,
00:47:23 this is solid-phase peptide synthesis.
00:47:26 And I used to say,
00:47:28 but Bruce, it's solid-phase synthesis.
00:47:31 You can do anything with this.
00:47:34 And he says, of course.
00:47:36 And it turns out that I actually made
00:47:38 the first dinucleotide
00:47:40 on the solid support in Bruce's lab.
00:47:42 I made DTT in his lab.
00:47:45 But it was very clear to me from the beginning,
00:47:47 and I think just as clear to Bruce,
00:47:49 that this methodology was applicable
00:47:51 to chemistry in general.
00:47:54 And in fact, I really,
00:47:56 I think the first science paper review he wrote,
00:48:00 I got him to generalize the scheme
00:48:04 to make it a polymeric protecting group
00:48:06 and generalize the monomer units
00:48:09 because he never wanted to
00:48:14 overemphasize or over-claim anything.
00:48:19 Maurice Manning was among the many peptide chemists
00:48:22 who soon used the new synthetic method.
00:48:24 I quite honestly have to say that
00:48:26 had it not been for the solid-phase method,
00:48:28 I would have given up peptide chemistry
00:48:31 because the classical method of peptide chemistry
00:48:34 in those days was very time-consuming,
00:48:38 I mean, it could take you anywhere
00:48:40 from six months to a year
00:48:42 to make an oxytocin analog by the classical methods.
00:48:46 But once the solid-phase method came along,
00:48:48 and I could see, you know,
00:48:50 while others were doing,
00:48:52 Bruce in his lab and John making,
00:48:54 this was fantastic,
00:48:55 but once we got going,
00:48:57 especially down in Toledo,
00:48:59 one person could make 30 analogs a year.
00:49:02 So you can see the increased efficiency
00:49:05 that the solid-phase method brought along.
00:49:07 It was phenomenal.
00:49:08 Very quickly, we developed methods
00:49:10 and other people developed methods
00:49:12 to make larger quantities of peptides,
00:49:14 which were not possible at that time
00:49:16 except for extended periods of time.
00:49:18 The effort that would be required
00:49:20 required extensive periods of time
00:49:22 to get that much by solution methods.
00:49:24 So I think it's very important for Bruce
00:49:26 to realize that, you know,
00:49:28 the farsighted people in the field
00:49:30 saw the significance of his work.
00:49:36 When I wrote the first paper in 1963,
00:49:42 I pointed out that this methodology
00:49:45 ought to lend itself well to automation.
00:49:48 And so we were thinking about it
00:49:51 right from the beginning.
00:49:52 Then after I got the method working,
00:49:55 Dr. Wooley and I got an NIH supplement
00:50:00 to our grant to build a machine.
00:50:04 So with that in hand,
00:50:05 I went in and talked to John Stewart,
00:50:07 the colleague here,
00:50:09 and invited him to work with me
00:50:11 on the construction of a synthesizer.
00:50:15 And he was very enthusiastic
00:50:17 and said yes, he'd like to do that.
00:50:19 So that was the beginning.
00:50:21 And then he laid out,
00:50:23 he was good at electronics,
00:50:25 and he laid out the wiring diagram
00:50:28 in some detail.
00:50:30 I spent more time on the mechanics,
00:50:34 the plumbing system,
00:50:36 and the chemistry.
00:50:37 And he spent more on the
00:50:39 electrical end of things.
00:50:41 What you can see is a reaction vessel,
00:50:45 which we already had in the manual method.
00:50:48 And that's shown here.
00:50:50 And it has the resin in it
00:50:52 with the pheptide.
00:50:55 Over here is a pump to deliver solvents
00:50:58 to the reaction vessel.
00:51:01 Over here is a rotary selector valve
00:51:04 to pick the right solvent
00:51:06 and the right reagent at the right time.
00:51:08 And there is another rotary valve
00:51:12 to select the right amino acid
00:51:14 at the right time.
00:51:16 The key to the success of the instrument
00:51:19 was a rotary selector valve.
00:51:22 And this is quite commonplace today
00:51:24 for HPLC solvent selection
00:51:27 or other purposes.
00:51:30 However, that was a totally new thing
00:51:32 in those days.
00:51:33 The guy who ran that was an expert
00:51:36 Swedish machinist named Nils Jornberg.
00:51:39 And he designed and built
00:51:41 a fantastic all-teflon
00:51:43 rotary selector valve.
00:51:46 We can have six amino acids lined up.
00:51:49 This will pick one at a time
00:51:51 and feed them into this cycle,
00:51:53 which then goes into the synthesis.
00:51:56 And the solvents are removed by a vacuum.
00:51:58 So that's the basic...
00:52:01 And this whole thing shakes, of course.
00:52:03 So that's the mechanical end.
00:52:05 Over here is the programmer,
00:52:07 which controls the events over there.
00:52:10 We have a set of timers
00:52:12 and this tenor drum.
00:52:17 It's an electromechanical device.
00:52:20 And it operates...
00:52:21 You set pins in it
00:52:23 to make your program.
00:52:25 Then it operates switches.
00:52:27 The switches operate the events over there.
00:52:30 When this goes around 100 steps,
00:52:33 then you will have added one amino acid
00:52:36 to the peptide chain.
00:52:37 So this is our synthesizer
00:52:39 and it works quite well.
00:52:43 It's the thing that Merck-Goude used
00:52:45 for the ribonuclease synthesis.
00:52:50 The first synthesizer that I know of
00:52:54 besides ours,
00:52:56 was by Art Robinson,
00:52:58 who was a student,
00:52:59 who came to our lab
00:53:01 to learn peptide chemistry.
00:53:03 And he went home and built a machine.
00:53:05 Right after that,
00:53:06 Victor Hruby,
00:53:07 he used to be across the street
00:53:08 with D'Avigno,
00:53:09 he came over
00:53:10 and we gave him some blueprints,
00:53:12 talked to him about it.
00:53:14 And he went back to Arizona,
00:53:17 University of Arizona,
00:53:18 and he built a machine.
00:53:21 I went to the University of Arizona.
00:53:23 I asked Professor Merrifield
00:53:25 if I should build an instrument
00:53:28 because I wanted to be able
00:53:29 to make peptides quickly
00:53:30 because I wanted to do NMR studies
00:53:32 and to put deuterated amino acids
00:53:34 into peptides
00:53:35 so that I could make the assignments
00:53:37 properly and so forth.
00:53:38 And he said,
00:53:39 sure, just come over anytime you want to
00:53:41 and I'll help you
00:53:42 to get ready to do this.
00:53:44 So I went and talked to him a few times
00:53:47 when I was still a postdoc
00:53:49 with Professor D'Avigno.
00:53:50 And then when I went to Arizona
00:53:52 about three months or four months
00:53:53 after I went there,
00:53:54 I went and visited Bruce
00:53:56 and spent almost, I think,
00:53:58 three or four days with him
00:53:59 in which he explained
00:54:00 all of the ways
00:54:01 in which a solid phase instrument worked.
00:54:04 He was very anxious for other people
00:54:05 to try his method
00:54:07 and he was extremely helpful.
00:54:10 He gave me the blueprints, actually,
00:54:12 for his first machine,
00:54:14 I think before it was published
00:54:16 and so forth
00:54:17 so we could use these things
00:54:19 and show them to our,
00:54:20 I wasn't an electronic technician
00:54:22 or anything,
00:54:23 so we could show these things
00:54:24 to our electronic people
00:54:25 at the University of Arizona
00:54:27 so they could help us build this instrument,
00:54:29 which I did in 1968, 69.
00:54:41 In Copenhagen,
00:54:42 Kai Brunfeld built an early machine
00:54:44 that became the first
00:54:45 commercial synthesizer.
00:54:47 Schwartz Biochemical Company
00:54:48 in New York produced it.
00:54:50 The Beckman Synthesizer
00:54:52 was probably the most successful
00:54:53 commercial machine
00:54:54 among the many built
00:54:56 between 1968 and 1972.
00:54:59 Bob Hodges,
00:55:00 while in Merrifield's lab,
00:55:01 added a monitoring system
00:55:03 to their Beckman Synthesizer.
00:55:05 The monitor automatically performed
00:55:07 a picrate titration
00:55:08 after each coupling
00:55:10 using the assay
00:55:11 developed by Balls-Giessen.
00:55:13 If significant amounts
00:55:14 of uncoupled amino groups
00:55:16 were still present,
00:55:17 the machine would go on hold
00:55:19 until the problem was corrected.
00:55:21 Eventually,
00:55:22 this instrument
00:55:23 laid the groundwork
00:55:24 for later commercial machines.
00:55:31 All these were
00:55:32 discontinuous batch machines
00:55:33 like the original.
00:55:39 Soon,
00:55:40 continuous flow machines
00:55:41 were constructed.
00:55:42 Initially,
00:55:43 they had the same problems
00:55:44 that Merrifield encountered
00:55:46 due to resin compression.
00:55:48 But Shepard and Atherton
00:55:49 overcame this difficulty
00:55:51 by putting their polyamide resin
00:55:53 inside a rigid porous zeolite cage.
00:55:55 They built
00:55:56 the photometric monitoring system
00:55:58 to estimate the extent
00:55:59 of coupling and deprotection.
00:56:01 It was based on the uptake
00:56:02 or release of the FMOC group.
00:56:04 This instrument
00:56:05 was marketed by Pharmacia
00:56:07 and by Millipore
00:56:08 and became quite popular.
00:56:10 I think the commercial instruments,
00:56:11 some of them,
00:56:12 have been a great benefit.
00:56:13 They're much more sophisticated
00:56:15 than this.
00:56:16 They have computer controls
00:56:18 and even some are robots.
00:56:23 And the robot
00:56:24 will make large numbers
00:56:26 essentially simultaneously.
00:56:36 With the availability
00:56:37 of the new solid phase method
00:56:39 and the automated synthesizer,
00:56:41 it was possible
00:56:42 to undertake the synthesis
00:56:43 of much larger
00:56:44 and more complicated molecules.
00:56:47 We wanted to test
00:56:48 the limits of our methodology.
00:56:51 And we knew
00:56:54 we could make peptides
00:56:55 of 20 or 30 amino acids.
00:56:57 Could you make something
00:56:58 over 100?
00:56:59 Well, we picked ribonuclease.
00:57:01 In a sense,
00:57:02 it's kind of a Rockefeller enzyme.
00:57:05 It was discovered here
00:57:07 by DeVos
00:57:08 and crystallized by Kunitz
00:57:10 and the molecular weight
00:57:13 Rotan worked on.
00:57:15 Morenstein did the sequence of it.
00:57:19 When Bernd Gutter
00:57:20 joined the Merrifield group,
00:57:22 he quickly put
00:57:23 the new technique to use.
00:57:25 In 1968,
00:57:26 he undertook
00:57:27 the total synthesis
00:57:28 of ribonuclease A.
00:57:30 He successfully synthesized
00:57:32 this 124 residue protein.
00:57:35 His ribonuclease A
00:57:36 had a specific activity
00:57:38 of 80%.
00:57:40 It had the correct amino acid composition,
00:57:42 substrate specificity,
00:57:44 and antibody specificity.
00:57:47 I started out manually.
00:57:49 I later switched
00:57:50 to this homemade automate
00:57:52 that was put
00:57:53 into the Rockefeller machine shop.
00:57:55 And I think,
00:57:58 I couldn't tell,
00:57:59 but I think it was something like
00:58:01 two months for the synthesis
00:58:03 and then maybe
00:58:06 twice or three times
00:58:07 this time for the purification.
00:58:10 Considering that
00:58:12 the chemistry of solid phase,
00:58:15 of the solid phase method,
00:58:17 mainly coupling procedures,
00:58:19 protecting groups,
00:58:20 and purification procedures,
00:58:22 and the instrumentation
00:58:25 were, of course,
00:58:26 not as advanced as they are now.
00:58:28 I think,
00:58:29 considering this,
00:58:30 I think
00:58:32 that it was quite remarkable
00:58:34 that we finally had a material
00:58:36 with almost full enzymatic activity.
00:58:39 This work showed
00:58:40 that a real protein
00:58:41 with true enzymatic activity
00:58:43 could be assembled
00:58:44 from simple amino acid derivatives.
00:58:46 It confirmed Anfinsen's hypothesis
00:58:49 that the primary structure of a protein
00:58:51 can determine its tertiary structure.
00:58:54 With this achievement,
00:58:55 Emil Fischer's dream
00:58:56 of protein synthesis
00:58:57 was finally realized.
00:59:00 At this same time,
00:59:01 the exploratory research group
00:59:03 of Merck, Sharp, and Dohm
00:59:05 under Robert Denkerwalter
00:59:06 and Ralph Hirschman,
00:59:07 with the strong support
00:59:08 of Max Tischler,
00:59:09 undertook the synthesis
00:59:11 of ribonuclease S-protein 21 to 124
00:59:14 by using fragment synthesis
00:59:16 in solution.
00:59:17 After combination with S-peptide,
00:59:19 they obtained some enzymatic activity.
00:59:22 It really grew out of
00:59:25 us trying to prove
00:59:28 that the methods
00:59:29 that we were working on
00:59:31 actually could be applied
00:59:32 to making really big peptides
00:59:35 and something that had
00:59:38 a real activity,
00:59:42 something that would bring us
00:59:44 close to the machinery of life.
00:59:47 We had several major groups
00:59:50 of chemists under Ralph
00:59:53 setting up a strategy.
00:59:55 This was not the same
00:59:57 as the linear strategy
00:59:59 that Merrifield moved towards.
01:00:04 It was a complex strategy
01:00:07 of building up pieces
01:00:09 of the enzyme.
01:00:11 Ralph was a key element
01:00:13 in bringing together
01:00:15 all the strategies
01:00:17 that we executed.
01:00:19 I think there was
01:00:21 a great deal of excitement
01:00:23 and recognition
01:00:24 that we were taking
01:00:27 an important step,
01:00:28 that we'd moved from one stage
01:00:31 in chemical synthesis
01:00:32 to another.
01:00:35 Even the highest levels
01:00:37 of management were really pleased
01:00:41 that we were doing
01:00:42 something important.
01:00:43 I have a picture
01:00:44 of all the people
01:00:45 that were participants.
01:00:48 I think when we pulled
01:00:50 the group all together
01:00:52 in a room,
01:00:53 I think it was close
01:00:54 to 50 people.
01:00:55 Ralph Hirschman
01:00:57 and Bob Dankwalter
01:00:59 did hide somewhat
01:01:02 the amount of effort
01:01:04 that actually went into this.
01:01:06 The president of the company
01:01:08 at our celebration
01:01:10 was actually quite surprised
01:01:13 at how many people
01:01:15 had actually been involved
01:01:17 in carrying out this synthesis.
01:01:21 But he recognized
01:01:25 the importance.
01:01:28 About 10 years later,
01:01:29 Yajima and Fuji
01:01:30 also prepared ribonuclease A
01:01:32 by solution fragment synthesis.
01:01:35 They obtained
01:01:36 a fully active enzyme
01:01:37 after purifying
01:01:38 the crude product
01:01:39 by affinity chromatography.
01:01:42 The solid phase approach
01:01:43 enabled more detailed studies
01:01:45 of the enzymatic properties
01:01:47 of ribonuclease A.
01:01:49 Bernd Gutte, Michael Lin,
01:01:51 and later Bob Hodges
01:01:52 showed that the carboxyl
01:01:54 terminal synthetic
01:01:55 tetradecapeptide
01:01:56 could be used
01:01:57 to activate
01:01:58 shortened ribonuclease 1 to 118.
01:02:01 They studied the role
01:02:02 of different residues
01:02:03 at the carboxyl terminus,
01:02:06 much as Hoffman
01:02:07 and Scaffoni had done
01:02:08 with the S-peptide
01:02:09 at the amino terminus.
01:02:12 They also constructed
01:02:13 the first non-covalently bound
01:02:15 three-component protein
01:02:17 consisting of ribonuclease
01:02:19 S-peptide 1 to 20,
01:02:21 C-peptide 111 to 124,
01:02:24 and a core protein
01:02:25 21 to 118.
01:02:27 The complex had
01:02:28 good enzymatic activity.
01:02:31 In 1974,
01:02:33 Gutte undertook
01:02:34 a de novo synthesis
01:02:35 of a shortened protein
01:02:36 with ribonuclease specificity.
01:02:42 Ribonuclease synthesis,
01:02:44 again, was the nucleus
01:02:46 and a model of the X-ray structure
01:02:49 of ribonuclease
01:02:50 that was one flight up
01:02:51 from Bruce's lab
01:02:54 in Professor Moore's department.
01:02:57 They had this ribonuclease model,
01:02:59 and in the night hours
01:03:00 when nobody was around,
01:03:02 I started to play around with it
01:03:05 and to sort of construct
01:03:08 from this complete model
01:03:10 of the ribonuclease
01:03:11 a mini-ribonuclease.
01:03:14 The result was that
01:03:16 one could do this.
01:03:17 It had still some activity.
01:03:19 And then from this arose the idea
01:03:21 that it may be possible
01:03:23 to even come up
01:03:25 with completely new proteins,
01:03:27 sort of de novo designed proteins.
01:03:29 You know, this knowledge
01:03:30 that an enzyme
01:03:32 doesn't have to be
01:03:34 over 100 residues,
01:03:35 but it can be maybe 60 residues
01:03:37 and still be active,
01:03:38 and the fact that you could
01:03:40 maybe design
01:03:42 with a certain probability
01:03:44 a helix or a beta sheet,
01:03:46 is sort of where the pieces
01:03:48 are put together
01:03:49 and to try to make some new proteins.
01:03:52 This is considered to be
01:03:53 the first de novo synthesis
01:03:55 of a designed protein.
01:03:57 Examples of proteins synthesized
01:03:59 by the solid phase method include
01:04:01 inhibin,
01:04:03 HIV protease,
01:04:05 chaperonin-10,
01:04:07 migration inhibitor factor,
01:04:09 leukemia protease,
01:04:11 integrin,
01:04:13 and colony stimulating factor.
01:04:15 Sakakibara realized
01:04:17 that the main obstacle
01:04:18 to the synthesis of proteins
01:04:20 by solution methods
01:04:21 was the insolubility
01:04:22 of large protected intermediates.
01:04:25 He set out to devise
01:04:26 better solvent mixtures.
01:04:28 The best solvent mixture
01:04:29 used chloroform
01:04:30 with trifluoroethanol,
01:04:32 hexafluoroisopropanol,
01:04:34 or phenol.
01:04:35 Virtually all of the several hundred
01:04:37 medium and large peptides examined
01:04:39 were now soluble.
01:04:41 Examples of their successful
01:04:42 protein synthesis
01:04:43 include human midkind
01:04:45 and the 238 residue precursor
01:04:48 of the green fluorescent protein.
01:04:57 The simultaneous multiple synthesis
01:04:59 of peptides
01:05:00 was anticipated
01:05:01 by a number of laboratories,
01:05:03 but it remained for Gason and Houghton
01:05:04 to independently achieve this goal.
01:05:07 Gason used multiple plastic pins
01:05:09 to build a large set of peptides,
01:05:11 while Houghton used
01:05:12 small porous plastic bags.
01:05:16 Mario Gason's paper came out in 1984
01:05:19 using the pin approach.
01:05:20 This prompted our desire
01:05:22 to have larger amounts of peptides,
01:05:24 and we came up with the concept
01:05:26 called the tea bag approach
01:05:28 or the present packet approach.
01:05:30 And this enabled us to move
01:05:31 very much more quickly
01:05:33 to make individual peptides
01:05:35 because we could capitalize
01:05:36 on the commonality
01:05:37 of all the wash steps,
01:05:39 the neutralization steps,
01:05:40 the deprotection steps,
01:05:41 and the only individual steps
01:05:42 where the resin packets
01:05:43 became separate
01:05:44 was in the addition
01:05:45 of the next individual
01:05:47 specific amino acid
01:05:48 for that particular given peptide.
01:05:51 So this enabled us
01:05:52 to go approximately
01:05:54 10 to 20 times faster
01:05:55 than the existing method,
01:05:56 and very importantly
01:05:57 50 times less expensive.
01:05:59 So this enabled us
01:06:00 to jump into a whole range of studies
01:06:02 that were simply economically
01:06:03 not possible previously.
01:06:05 So early on,
01:06:06 in the early mid-80s,
01:06:08 we jumped into making
01:06:09 mixtures of peptides,
01:06:11 and this was the next step.
01:06:13 What we found very quickly,
01:06:15 however,
01:06:16 was that the number of peptides
01:06:17 we needed,
01:06:18 individual peptides,
01:06:19 was still the limiting factor.
01:06:21 And then we jumped into
01:06:22 a procedure using
01:06:24 mixture-based combinatorial libraries
01:06:26 which got an enormous number
01:06:28 of compounds.
01:06:29 The initial positional scan
01:06:32 mixture-based library work
01:06:34 was a hexapeptide,
01:06:35 and this is 64 million hexapeptides
01:06:37 with just the L-amino acids.
01:06:39 So these procedures
01:06:40 are all based
01:06:41 on earlier foundation
01:06:43 of Bruce Merrifield's work
01:06:45 in solid phase,
01:06:46 and they enabled us
01:06:47 to jump forward much more quickly,
01:06:48 and none of these
01:06:49 would have been possible
01:06:50 with the existing methods
01:06:51 that were available at the time.
01:06:53 Fodor and his collaborators
01:06:55 used photolithography
01:06:56 to produce all sequences
01:06:58 of a set of amino acids
01:06:59 in a given peptide,
01:07:01 each with a defined address
01:07:03 on a plate.
01:07:05 In 1990,
01:07:06 Furka reported the design
01:07:08 of the divide-couple-and-mix strategy
01:07:10 for the combinatorial synthesis
01:07:12 on resin beads
01:07:13 of a mixture containing
01:07:14 all possible combinations
01:07:16 of a given size
01:07:17 and fixed number
01:07:18 of amino acids.
01:07:20 A hexapeptide library
01:07:21 containing all combinations
01:07:23 of just seven amino acids
01:07:25 gives rise to over
01:07:26 100,000 peptides.
01:07:28 At about the same time,
01:07:30 Kit Lam independently devised
01:07:32 a similar split-synthesis strategy
01:07:34 to solve the problem
01:07:35 of making combinatorial libraries
01:07:37 containing equimolar amounts
01:07:39 of peptides.
01:07:40 In 1987,
01:07:42 when I became
01:07:43 a clinical fellow
01:07:44 in medical oncology
01:07:46 at the Arizona Cancer Center,
01:07:48 at that time,
01:07:49 I started to work
01:07:51 on generating
01:07:52 a large peptide library,
01:07:55 a solution phase peptide library
01:07:57 from which I was hoping
01:07:59 to be able to isolate
01:08:00 peptides that bind
01:08:01 to the specific
01:08:02 cell surface etiotypes
01:08:03 of the lymphoma cell.
01:08:05 So that really began
01:08:07 my work
01:08:08 on combinatorial chemistry.
01:08:10 For the experiment,
01:08:11 what we did is to immobilize
01:08:12 a specific anti-peptide
01:08:14 monoclonal antibody
01:08:15 on a solid support
01:08:17 to form an affinity column.
01:08:19 Then we used
01:08:21 a solid phase peptide synthesis
01:08:23 approach to generate
01:08:24 a solution peptide library.
01:08:28 And then we
01:08:30 poured these solution peptide libraries
01:08:32 over the monoclonal antibody column.
01:08:36 Using this approach,
01:08:37 we were able to
01:08:39 spike the peptide library
01:08:41 of a specific peptide first,
01:08:43 and then use the column
01:08:45 to retrieve that peptide back.
01:08:47 However, we were unable
01:08:49 to use the same approach
01:08:52 to isolate a peptide
01:08:55 from the library
01:08:57 that binds to this antibody.
01:09:01 And I think the problem
01:09:03 we were encountering
01:09:04 was that we did not have
01:09:05 an equal molar ratio
01:09:07 of peptides.
01:09:08 In other words,
01:09:09 some peptides have
01:09:10 very large quantities
01:09:11 and some have
01:09:12 very little quantity.
01:09:14 So the one that
01:09:15 the antibody binds to
01:09:17 may not be present
01:09:18 in sufficient quantity
01:09:19 for us to retrieve it.
01:09:21 And so this became
01:09:22 a big problem for us.
01:09:24 And one night,
01:09:26 in 1989,
01:09:28 while I was
01:09:30 sitting in my rocking chair
01:09:31 trying to figure out
01:09:32 how to solve this problem,
01:09:33 and suddenly I had an Eureka.
01:09:35 And I figured out that
01:09:37 there's an approach
01:09:38 to generate
01:09:41 equal molar ratio of peptides.
01:09:43 So what we call
01:09:44 the split synthesis approach.
01:09:46 And that is to
01:09:47 split the resin speed
01:09:48 into equal volumes
01:09:52 in multiple fractions,
01:09:53 and then each of the fractions
01:09:54 will react with
01:09:55 a specific amino acid.
01:09:57 And then we can mix
01:09:58 all the resin speeds
01:10:02 together again
01:10:03 after the first coupling,
01:10:04 and then we split them again
01:10:05 in the subsequent steps,
01:10:06 and so on and so forth.
01:10:08 So after several cycles
01:10:10 of coupling with
01:10:11 splitting into
01:10:13 20 different amino acids,
01:10:15 we were able to generate
01:10:16 a pentapeptide library
01:10:18 with 3.2 million
01:10:19 possible permutations.
01:10:21 Lam contributed
01:10:22 a major insight
01:10:23 when he realized
01:10:24 that in such a mixture,
01:10:25 each individual bead
01:10:26 contained multiple copies
01:10:27 of only a single
01:10:29 peptide sequence.
01:10:31 About 30 minutes after
01:10:33 that I figured out
01:10:35 that the split synthesis
01:10:36 approach will work,
01:10:39 I have a second Eureka.
01:10:40 And that one is
01:10:41 I suddenly realized that
01:10:44 using the split synthesis
01:10:45 approach to generate
01:10:47 this library,
01:10:48 each bead will contain
01:10:49 one single peptide.
01:10:50 That is what we call
01:10:51 the one bead,
01:10:52 one peptide concept.
01:10:54 And I guess perhaps
01:10:56 the reason I can figure it out
01:10:58 was because of my
01:10:59 immunology background,
01:11:00 and I was thinking that,
01:11:01 you know, that the way
01:11:03 we were doing this
01:11:06 split synthesis approach
01:11:07 and each bead turned out
01:11:10 to have different
01:11:11 individual peptides,
01:11:12 and then we can use
01:11:13 a immunological approach
01:11:15 to actually do the screening
01:11:17 able to retrieve
01:11:19 the peptide that may be
01:11:21 of biological interest.
01:11:22 And then we decided
01:11:24 to proceed and embark
01:11:27 on a series of experiments
01:11:29 and able to reduce it
01:11:31 to practice and a proof
01:11:33 of concept of this approach
01:11:35 within nine months.
01:11:37 And we first presented
01:11:39 our work at the
01:11:40 American Peptide Society
01:11:41 meeting at Boston
01:11:43 in June of 91,
01:11:45 and then we also published
01:11:46 a paper about this technique
01:11:48 in December 91 in Nature.
01:11:50 An array of peptide beads
01:11:52 could be screened
01:11:53 by a suitable binding assay.
01:11:55 The fluorescent beads
01:11:57 are separated,
01:11:58 micro-sequenced,
01:11:59 and synthesized.
01:12:00 Over the last 10 years,
01:12:02 we have applied the
01:12:04 one bead, one compound
01:12:05 combinatorial library approach
01:12:07 to many areas of research.
01:12:09 We used multiple
01:12:11 different biological targets
01:12:12 which include monoclonal antibodies,
01:12:14 protein kinases,
01:12:15 cell surface receptors,
01:12:17 bacteria, etc.
01:12:20 And I'm very pleased
01:12:21 to say that the peptide chemists
01:12:25 are really the pioneers
01:12:26 in the field of
01:12:27 combinatorial chemistry,
01:12:29 starting with Dr. Bruce Merrifield
01:12:32 who invented the
01:12:34 solid phase techniques
01:12:35 back about 40 years ago.
01:12:39 Well, I had written
01:12:41 in more than one review article
01:12:44 that I think solid phase synthesis
01:12:48 would be a goldmine, I said,
01:12:52 for organic chemists
01:12:54 who would use it to facilitate
01:12:57 and direct their syntheses.
01:12:59 It took another 25 years
01:13:01 before major developments
01:13:03 along these lines
01:13:04 in organic synthesis
01:13:05 were accomplished.
01:13:06 An early example
01:13:07 is a benzodiazepine library.
01:13:11 In recent years,
01:13:12 K.C. Nicolaou has applied
01:13:14 solid phase combinatorial
01:13:16 synthesis techniques
01:13:17 to the synthesis
01:13:18 of more structurally complex
01:13:20 natural product-based libraries.
01:13:23 He points out,
01:13:24 Merrifield's pioneering work
01:13:25 in solid phase chemistry
01:13:27 revolutionized the field
01:13:28 of peptide synthesis.
01:13:30 The same philosophy
01:13:31 of solid phase chemistry
01:13:33 is now being implemented
01:13:34 in the latest revolution
01:13:36 in organic synthesis.
01:13:43 Dan Kemp devised a thiol capture
01:13:48 followed by an intramolecular
01:13:50 first-order reaction
01:13:51 to link two peptides
01:13:53 at high effective concentration.
01:13:56 In the early 50s,
01:13:57 Wieland's work
01:13:58 showing that thioacids
01:13:59 and thiophenyl esters
01:14:01 are highly activated
01:14:02 was the forerunner
01:14:03 of the field now called
01:14:04 peptide ligation.
01:14:06 Some 30 years later,
01:14:08 Blake reacted
01:14:09 a minimally protected
01:14:10 peptide thioacid
01:14:11 with silver ion
01:14:12 and a second peptide
01:14:14 to give a new amide bond.
01:14:17 In 1994,
01:14:18 both the Kent and Tam groups
01:14:20 independently used
01:14:21 thioester chemistry
01:14:23 to effect a fragment coupling
01:14:24 between two fully
01:14:25 unprotected peptides.
01:14:28 The method departs
01:14:29 from the concept
01:14:30 introduced by Bergman
01:14:31 60 years earlier
01:14:33 because it is conducted
01:14:34 in water
01:14:35 without an added
01:14:36 coupling reagent
01:14:37 and does not use
01:14:38 protecting groups
01:14:39 even for cis or lyse residues.
01:14:42 In the simplest term,
01:14:44 peptide ligation
01:14:46 is a controlled
01:14:48 chemical reaction
01:14:50 to couple two molecules together
01:14:53 to form a specific bond
01:14:56 at a specific site.
01:14:58 In this case,
01:15:00 at least one of the molecules
01:15:02 is a peptide
01:15:04 or a protein
01:15:05 in its native state
01:15:07 and free of protecting groups
01:15:09 and a bond being formed
01:15:11 is a peptide
01:15:13 or amide bond.
01:15:14 It is a conceptually
01:15:17 different method
01:15:21 than the conventional
01:15:24 peptide synthesis methods
01:15:27 because peptides
01:15:30 are proteins
01:15:31 in their native states
01:15:32 contain many functional groups
01:15:34 such as amines
01:15:36 and carboxylic acids.
01:15:39 It is difficult
01:15:40 to form such a
01:15:42 specific peptide bond
01:15:44 between two free peptides
01:15:46 in the presence of so many
01:15:47 reactive functional groups.
01:15:51 The conventional methods
01:15:53 require protecting groups,
01:15:56 coupling reagents,
01:15:57 and conditions
01:16:00 in organic solvents.
01:16:03 But such strategy
01:16:04 also requires
01:16:07 the repetitive process
01:16:09 of the protection,
01:16:10 which is labor intensive
01:16:13 and sometimes inefficient
01:16:15 and often provides
01:16:17 low yields.
01:16:20 Peptide ligation
01:16:22 does not need any of these
01:16:27 to achieve the same result
01:16:30 of a peptide or amide bond.
01:16:33 What is so unique
01:16:34 about peptide ligation
01:16:35 is that it can accomplish
01:16:38 what the conventional methods do
01:16:40 without the protecting groups
01:16:43 and coupling reagents.
01:16:45 With the purpose of producing
01:16:47 much larger proteins,
01:16:48 a semi-synthetic procedure
01:16:50 has been devised independently
01:16:51 at Rockefeller University
01:16:53 by Muir and Cole
01:16:54 and at New England Biolabs
01:16:56 by Evans, Benner, and Zhu.
01:16:58 The process uses
01:16:59 synthetic peptides
01:17:00 and large proteins
01:17:02 produced by molecular
01:17:03 biological procedures.
01:17:05 These peptides
01:17:06 are then ligated
01:17:07 to the proteins
01:17:08 using a method called
01:17:09 entine-mediated protein ligation.
01:17:12 Proteins as large
01:17:13 as 600 residues
01:17:14 have been produced
01:17:15 in this way.
01:17:17 Currently,
01:17:18 there is no upper limit in sight.
01:17:28 The value of peptides as drugs
01:17:30 is still an open question
01:17:31 that generates vigorous debate.
01:17:34 Eberle expressed
01:17:35 the following opinion.
01:18:00 The same or similar peptides
01:18:02 were done by Sandoz.
01:18:04 They also had calcitonin.
01:18:06 Sandoz produced
01:18:07 the salmon calcitonin
01:18:09 whereas the SIBA
01:18:10 had the human calcitonin.
01:18:12 And when SIBA and Sandoz
01:18:14 merged
01:18:16 some, I think,
01:18:18 eight or so years ago,
01:18:20 then, of course,
01:18:22 they could continue
01:18:24 with their work
01:18:26 in the same way
01:18:28 or they could continue
01:18:30 with a better one
01:18:31 which was the salmon calcitonin.
01:18:33 So what I say is
01:18:35 many peptides have been produced
01:18:37 by these companies
01:18:38 and are still being produced
01:18:40 and sold.
01:18:41 Of course,
01:18:43 in the last ten years,
01:18:45 the peptides
01:18:47 were no more so much
01:18:49 in the focus of management.
01:18:51 So management decided
01:18:53 to use approaches
01:18:55 as they are used
01:18:56 in other countries
01:18:57 namely small molecules.
01:18:59 So peptides served merely
01:19:01 as a model to develop
01:19:03 the assays and so on.
01:19:05 And the small molecules
01:19:07 have become the predominant
01:19:09 topics for these
01:19:11 companies.
01:19:13 And so the big peptide groups
01:19:15 like the ones of SIBA
01:19:17 with many peptide chemists
01:19:19 have slowly
01:19:21 shrunk a little bit
01:19:23 to perhaps
01:19:25 a few, a handful of peptide chemists
01:19:27 left at Novartis
01:19:29 at the present time.
01:19:30 I also believe that
01:19:32 as soon as
01:19:34 new galenic
01:19:36 models are being
01:19:38 developed to apply peptides
01:19:40 through the intestinal wall,
01:19:42 peptides
01:19:44 may become
01:19:46 more important again
01:19:48 as drugs.
01:19:49 The current situation
01:19:50 has been evaluated
01:19:51 by Teresa Kubiak.
01:19:53 1987, so there was
01:19:55 the HIV protease
01:19:57 inhibitors project,
01:19:59 renin inhibitors project,
01:20:01 the growth hormone releasing
01:20:03 factor analog project,
01:20:05 and that was the one that I was
01:20:07 working on.
01:20:08 And our hope was
01:20:10 to develop some of those
01:20:12 peptide leads into drugs.
01:20:14 And to our disappointment,
01:20:16 even though we were very successful
01:20:18 scientifically, the compounds
01:20:20 that we
01:20:22 chose for development failed
01:20:24 because we couldn't formulate them.
01:20:26 So there was
01:20:28 such an anti-peptide climate
01:20:30 then, no one within
01:20:32 an industrial
01:20:34 setting wanted to even hear
01:20:36 the word peptide. The same happened
01:20:38 with the Hoffman-Leroy group
01:20:40 and also
01:20:42 similar projects with different peptide
01:20:44 targets at Merck and other companies.
01:20:46 But now, the year is
01:20:48 2000, and it's so pleasing
01:20:50 to see that peptides are coming back
01:20:52 even though they are coming back
01:20:54 in a different capacity.
01:20:56 There is such an enormous explosion
01:20:58 of information coming
01:21:00 from various genome
01:21:02 projects. C. elegans,
01:21:04 drosophila, human genome
01:21:06 projects. And
01:21:08 so many novel
01:21:10 GPCRs have been identified
01:21:12 for which the native
01:21:14 ligands are not known.
01:21:16 And the vast majority
01:21:18 of those receptors are believed to be
01:21:20 peptide receptors.
01:21:22 Those might be even new subtypes
01:21:24 of the known receptors
01:21:26 or a completely novel
01:21:28 one for which
01:21:30 the ligands must be discovered
01:21:32 yet. So why are
01:21:34 peptides needed in order
01:21:36 to find the function of a peptide?
01:21:38 The first of the
01:21:40 receptor, the first step is to match it
01:21:42 with its native ligand.
01:21:44 And since the ligands are not
01:21:46 known, so combinatorial peptide
01:21:48 libraries are very important.
01:21:50 So it's the solid phase
01:21:52 by which those peptides are
01:21:54 made. Not only that,
01:21:56 there are so many
01:21:58 new peptides predicted from
01:22:00 the precursor genes, again,
01:22:02 coming from the cDNA sequences
01:22:04 from the genome projects.
01:22:06 Recently, during a round table discussion,
01:22:16 several leaders in the field predicted
01:22:18 some of the likely directions of research
01:22:20 and potential findings in peptide
01:22:22 science.
01:22:24 According to Arno Spatola,
01:22:26 but synthetic chemists need
01:22:28 to consider not only new strategies
01:22:30 of pro-drugs, but must also
01:22:32 be well informed about alternate
01:22:34 delivery methods and the special
01:22:36 requirements that accompany
01:22:38 these modes.
01:22:40 Murray Goodman comments on the
01:22:42 following. We now
01:22:44 enter an era of molecular diversity,
01:22:46 which includes combinatorial
01:22:48 syntheses of libraries,
01:22:50 de novo design of protein
01:22:52 mimetics, and the synthesis
01:22:54 of dendrimers and other
01:22:56 macro structures.
01:22:58 According to Daniel Weber,
01:23:00 traditional organic chemists
01:23:02 are learning to use solid phase
01:23:04 chemistry, and peptide chemists
01:23:06 are broadening the scope of their
01:23:08 reaction base well beyond
01:23:10 the formation of amide
01:23:12 bonds. Charles Deaber
01:23:14 extends these ideas.
01:23:16 The array of biophysical techniques
01:23:18 for structure deduction and their
01:23:20 capabilities have
01:23:22 been vastly improving and expanding.
01:23:24 It was apparent
01:23:26 that the established techniques,
01:23:28 including circular dichroism,
01:23:30 NMR, X-ray crystallography,
01:23:32 fluorescence,
01:23:34 and mass spectrometry,
01:23:36 along with computational chemistry
01:23:38 and several developing techniques,
01:23:40 are being put to novel and important
01:23:42 uses.
01:23:44 The importance of physical chemical
01:23:46 methods was extended by Robert Hodges.
01:23:48 Understanding protein folding
01:23:50 and protein stability is critical
01:23:52 in the prediction of protein structure.
01:23:54 It is obvious that
01:23:56 even with the massive expansion
01:23:58 of partial biology,
01:24:00 that is, NMR, spectroscopy,
01:24:02 and X-ray crystallography,
01:24:04 which is taking place around the world,
01:24:06 we will not keep pace
01:24:08 with the hundreds of thousands of new protein
01:24:10 sequences available
01:24:12 from the Human Genome Project.
01:24:14 But Robin Offred points out,
01:24:16 don't let the size
01:24:18 and number of these potential
01:24:20 targets daunt you.
01:24:22 I have two take-home messages to put to you.
01:24:24 The first is that
01:24:26 whatever the size of the protein concerned,
01:24:28 the largest things that we will normally
01:24:30 need to synthesize will be the functional
01:24:32 domains. These are
01:24:34 typically around 200 residues
01:24:36 each. I would say
01:24:38 to any younger scientists, or even
01:24:40 older ones, who are wondering whether
01:24:42 they should remain in or enter this field
01:24:44 that, if this sort of thing interests
01:24:46 you at all, stay with it.
01:24:48 Peptide scientists, with the ability
01:24:50 to have total control over structure,
01:24:52 which is the hallmark of what we do,
01:24:54 are uniquely placed to exploit
01:24:56 to the full the fantastic situation
01:24:58 which is developing around us.
01:25:00 The ball is in your court.
01:25:04 Tom Muir continues along these lines.
01:25:06 The field of chemical ligation
01:25:08 has so blossomed in recent years
01:25:10 that I would submit that the routine application
01:25:12 of organic chemistry to the
01:25:14 synthesis of large proteins is actually
01:25:16 a reality.
01:25:18 As the last speaker on the panel,
01:25:20 Victor Ruby offers the final summary
01:25:22 of the future of peptide science.
01:25:24 Essentially,
01:25:26 the human genome and its use
01:25:28 in applications is up for grabs,
01:25:30 and those of us interested in
01:25:32 ligand-slash-drug design
01:25:34 have enormous opportunities to make
01:25:36 seminal contributions.
01:25:38 The wave of the future will be collaboration,
01:25:40 so that the structural,
01:25:42 chemical, biological,
01:25:44 and behavioral effects of our designed
01:25:46 ligands and drugs can be more
01:25:48 rapidly designed and evaluated.
01:25:52 Bruce Merrifield closed the meeting
01:25:54 with the comments.
01:25:56 It is clear that the peptide field
01:25:58 is alive and well.
01:26:00 We can't predict the next new discoveries
01:26:02 in this field, but we can
01:26:04 all be sure that many exciting
01:26:06 developments lie ahead.
01:26:22 In my laboratory,
01:26:50 I formed a bond with you.
01:26:54 In my laboratory,
01:26:56 my peptide dreams came true.
01:27:00 Take it from an old pro,
01:27:02 she may have a cyst for you.
01:27:06 And in your laboratory,
01:27:10 your dreams will, too.